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There's several ways to do this outside of Excel; UNIX has 'uniq', but doesn't do unique by words, it does it by lines.
I've written a utility to take two sets of lists, and only remove those that contain the first set from the second set.
If you want it to only contain the similar lists between the two, I could easily modify it to do that, and it'll run on Windows with support tools.
Feel free to hit me up on ICQ.
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