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Jesus fucking christ.
It's not the SQL worm, that only affects MS SQL.
You are probably running out of connections.. And if mysql is taking 100% of your CPU, then whatever script you are running was written by a retarded monkey. You wouldn't believe the abuse I can put mysql through before it even starts to break a sweat.
The short of it: Talk to your sysadmin. He'll be able to up your connections, or restart the server, or whatever has gone wrong with MySQL.
Cheers,
Backov
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